HL_6UZ7_003

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUAAUUC

Length

7 nucleotides

Bulged bases

6UZ7|1|2|U|157, 6UZ7|1|2|U|158

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6UZ7_003 not in the Motif Atlas

Homologous match to HL_4V88_188

Geometric discrepancy: 0.3177

The information below is about HL_4V88_188

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

6UZ7|1|2|G|153
6UZ7|1|2|U|154
6UZ7|1|2|A|155
6UZ7|1|2|A|156
6UZ7|1|2|U|157
6UZ7|1|2|U|158
6UZ7|1|2|C|159

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain G

40S ribosomal protein S6

Chain Y

40S ribosomal protein S24