HL_6UZ7_022
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GAUGAUCAGAUACCGUC
- Length
- 17 nucleotides
- Bulged bases
- 6UZ7|1|2|U|1003
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6UZ7_022 not in the Motif Atlas
- Geometric match to HL_4V9I_038
- Geometric discrepancy: 0.3953
- The information below is about HL_4V9I_038
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_68572.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
6UZ7|1|2|G|993
6UZ7|1|2|A|994
6UZ7|1|2|U|995
6UZ7|1|2|G|996
6UZ7|1|2|A|997
6UZ7|1|2|U|998
6UZ7|1|2|C|999
6UZ7|1|2|A|1000
6UZ7|1|2|G|1001
6UZ7|1|2|A|1002
6UZ7|1|2|U|1003
6UZ7|1|2|A|1004
6UZ7|1|2|C|1005
6UZ7|1|2|C|1006
6UZ7|1|2|G|1007
6UZ7|1|2|U|1008
6UZ7|1|2|C|1009
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain 3
- Transfer RNA; tRNA
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain AA
- KLLA0D16027p
- Chain O
- 40S ribosomal protein S14
- Chain a
- 40S ribosomal protein S26
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