HL_6UZ7_045

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CAUAG

Length

5 nucleotides

Bulged bases

6UZ7|1|5|U|210, 6UZ7|1|5|A|211

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6UZ7_045 not in the Motif Atlas

Homologous match to HL_5TBW_006

Geometric discrepancy: 0.1323

The information below is about HL_5TBW_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

6UZ7|1|5|C|208
6UZ7|1|5|A|209
6UZ7|1|5|U|210
6UZ7|1|5|A|211
6UZ7|1|5|G|212

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain AC

KLLA0B07139p

Chain AY

KLLA0B05742p