HL_6UZ7_053
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UCUUGAAACA
- Length
- 10 nucleotides
- Bulged bases
- 6UZ7|1|5|C|621
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6UZ7_053 not in the Motif Atlas
- Homologous match to HL_5TBW_014
- Geometric discrepancy: 0.1091
- The information below is about HL_5TBW_014
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_43993.1
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 141
Unit IDs
6UZ7|1|5|U|613
6UZ7|1|5|C|614
6UZ7|1|5|U|615
6UZ7|1|5|U|616
6UZ7|1|5|G|617
6UZ7|1|5|A|618
6UZ7|1|5|A|619
6UZ7|1|5|A|620
6UZ7|1|5|C|621
6UZ7|1|5|A|622
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain AB
- 60S ribosomal protein L3
- Chain Ba
- RPL28
- Chain Be
- KLLA0E06843p
Coloring options: