HL_6UZ7_061

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CCUCAG

Length

6 nucleotides

Bulged bases

6UZ7|1|5|C|930, 6UZ7|1|5|A|933

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6UZ7_061 not in the Motif Atlas

Homologous match to HL_5TBW_022

Geometric discrepancy: 0.2991

The information below is about HL_5TBW_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

6UZ7|1|5|C|929
6UZ7|1|5|C|930
6UZ7|1|5|U|931
6UZ7|1|5|C|932
6UZ7|1|5|A|933
6UZ7|1|5|G|934

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain Ba

RPL28

Chain Bb

60S ribosomal protein L29

Chain Bo

60S ribosomal protein L44