HL_6UZ7_081

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UGAACAG

Length

7 nucleotides

Bulged bases

6UZ7|1|5|C|1835

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6UZ7_081 not in the Motif Atlas

Homologous match to HL_5TBW_042

Geometric discrepancy: 0.0986

The information below is about HL_5TBW_042

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

6UZ7|1|5|U|1831
6UZ7|1|5|G|1832
6UZ7|1|5|A|1833
6UZ7|1|5|A|1834
6UZ7|1|5|C|1835
6UZ7|1|5|A|1836
6UZ7|1|5|G|1837

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain AR

KLLA0E12453p