HL_6UZ7_100

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

AGCAGAAU

Length

8 nucleotides

Bulged bases

6UZ7|1|5|G|2866

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6UZ7_100 not in the Motif Atlas

Homologous match to HL_5TBW_062

Geometric discrepancy: 0.1228

The information below is about HL_5TBW_062

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_79150.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

12

Unit IDs

6UZ7|1|5|A|2865
6UZ7|1|5|G|2866
6UZ7|1|5|C|2867
6UZ7|1|5|A|2868
6UZ7|1|5|G|2869
6UZ7|1|5|A|2870
6UZ7|1|5|A|2871
6UZ7|1|5|U|2872

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain AH

KLLA0F04499p

Chain Bm

Ubiquitin fusion protein