HL_6UZ7_103

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGAGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6UZ7_103 not in the Motif Atlas

Geometric match to HL_5J7L_197

Geometric discrepancy: 0.1257

The information below is about HL_5J7L_197

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

6UZ7|1|5|C|2993
6UZ7|1|5|G|2994
6UZ7|1|5|A|2995
6UZ7|1|5|G|2996
6UZ7|1|5|A|2997
6UZ7|1|5|G|2998

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain 1

KLLA0F23265p

Chain AH

KLLA0F04499p

Chain Bm

Ubiquitin fusion protein