HL_6UZ7_104

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UGAUCA

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6UZ7_104 not in the Motif Atlas

Homologous match to HL_5TBW_066

Geometric discrepancy: 0.1334

The information below is about HL_5TBW_066

Detailed Annotation

Ribsomal LSU H95

Broad Annotation

Ribsomal LSU H95

Motif group

HL_65794.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

11

Unit IDs

6UZ7|1|5|U|3036
6UZ7|1|5|G|3037
6UZ7|1|5|A|3038
6UZ7|1|5|U|3039
6UZ7|1|5|C|3040
6UZ7|1|5|A|3041

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain AR

KLLA0E12453p

Chain AU

KLLA0D05181p

Chain Bd

KLLA0B02937p