HL_6UZ7_106

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUUUUUG

Length

7 nucleotides

Bulged bases

6UZ7|1|5|U|3163, 6UZ7|1|5|U|3166

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6UZ7_106 not in the Motif Atlas

Geometric match to HL_5TBW_018

Geometric discrepancy: 0.2643

The information below is about HL_5TBW_018

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_84570.1

Basepair signature

cWW-cWW-F

Number of instances in this motif group

6

Unit IDs

6UZ7|1|5|C|3161
6UZ7|1|5|U|3162
6UZ7|1|5|U|3163
6UZ7|1|5|U|3164
6UZ7|1|5|U|3165
6UZ7|1|5|U|3166
6UZ7|1|5|G|3167

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain AH

KLLA0F04499p

Chain AM

KLLA0B13409p