HL_6UZ7_107

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGGAAAGG

Length

8 nucleotides

Bulged bases

6UZ7|1|5|A|3211, 6UZ7|1|5|A|3212

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6UZ7_107 not in the Motif Atlas

Homologous match to HL_5TBW_069

Geometric discrepancy: 0.198

The information below is about HL_5TBW_069

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_24596.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

7

Unit IDs

6UZ7|1|5|C|3208
6UZ7|1|5|G|3209
6UZ7|1|5|G|3210
6UZ7|1|5|A|3211
6UZ7|1|5|A|3212
6UZ7|1|5|A|3213
6UZ7|1|5|G|3214
6UZ7|1|5|G|3215

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain AB

60S ribosomal protein L3

Chain AO

KLLA0F04675p