HL_6V39_009
3D structure
- PDB id
- 6V39 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.04 Å
Loop
- Sequence
- CUGGGAAG
- Length
- 8 nucleotides
- Bulged bases
- 6V39|1|AN1|A|313
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6V39_009 not in the Motif Atlas
- Homologous match to HL_7A0S_010
- Geometric discrepancy: 0.1363
- The information below is about HL_7A0S_010
- Detailed Annotation
- T-loop with 1 bulged base
- Broad Annotation
- T-loop
- Motif group
- HL_01609.3
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 18
Unit IDs
6V39|1|AN1|C|307
6V39|1|AN1|U|308
6V39|1|AN1|G|309
6V39|1|AN1|G|310
6V39|1|AN1|G|311
6V39|1|AN1|A|312
6V39|1|AN1|A|313
6V39|1|AN1|G|314
Current chains
- Chain AN1
- 23s ribosomal RNA
Nearby chains
- Chain T
- 50S ribosomal protein L24
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