HL_6V39_022
3D structure
- PDB id
- 6V39 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.04 Å
Loop
- Sequence
- CGUUGAAAAG
- Length
- 10 nucleotides
- Bulged bases
- 6V39|1|AN1|U|745, 6V39|1|AN1|A|749, 6V39|1|AN1|A|750
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6V39_022 not in the Motif Atlas
- Geometric match to HL_4WF9_023
- Geometric discrepancy: 0.1432
- The information below is about HL_4WF9_023
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50204.1
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 11
Unit IDs
6V39|1|AN1|C|742
6V39|1|AN1|G|743
6V39|1|AN1|U|744
6V39|1|AN1|U|745
6V39|1|AN1|G|746
6V39|1|AN1|A|747
6V39|1|AN1|A|748
6V39|1|AN1|A|749
6V39|1|AN1|A|750
6V39|1|AN1|G|751
Current chains
- Chain AN1
- 23s ribosomal RNA
Nearby chains
- Chain 1
- 50S ribosomal protein L34
- Chain D
- 50S ribosomal protein L3
- Chain R
- 50S ribosomal protein L22
- Chain Z
- 50S ribosomal protein L32
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