HL_6V39_076
3D structure
- PDB id
- 6V39 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.04 Å
Loop
- Sequence
- GGUAAAGGC
- Length
- 9 nucleotides
- Bulged bases
- 6V39|1|sN1|G|262
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6V39_076 not in the Motif Atlas
- Homologous match to HL_5J7L_006
- Geometric discrepancy: 0.1618
- The information below is about HL_5J7L_006
- Detailed Annotation
- GNRA related
- Broad Annotation
- GNRA related
- Motif group
- HL_84299.4
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
6V39|1|sN1|G|255
6V39|1|sN1|G|256
6V39|1|sN1|U|257
6V39|1|sN1|A|258
6V39|1|sN1|A|259
6V39|1|sN1|A|260
6V39|1|sN1|G|261
6V39|1|sN1|G|262
6V39|1|sN1|C|263
Current chains
- Chain sN1
- 16s Ribosomal RNA
Nearby chains
- Chain q
- 30S ribosomal protein S17
- Chain t
- 30S ribosomal protein S20
Coloring options: