HL_6V39_085
3D structure
- PDB id
- 6V39 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.04 Å
Loop
- Sequence
- CGGUGAAAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6V39_085 not in the Motif Atlas
- Homologous match to HL_6CZR_086
- Geometric discrepancy: 0.1427
- The information below is about HL_6CZR_086
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.4
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
6V39|1|sN1|C|686
6V39|1|sN1|G|687
6V39|1|sN1|G|688
6V39|1|sN1|U|689
6V39|1|sN1|G|690
6V39|1|sN1|A|691
6V39|1|sN1|A|692
6V39|1|sN1|A|693
6V39|1|sN1|U|694
6V39|1|sN1|G|695
Current chains
- Chain sN1
- 16s Ribosomal RNA
Nearby chains
- Chain g
- 30S ribosomal protein S7
- Chain k
- 30S ribosomal protein S11
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