HL_6V39_093

3D structure

PDB id

6V39 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.04 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

6V39|1|sN1|G|1029

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6V39_093 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.3919

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_40612.1

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

6V39|1|sN1|C|1025
6V39|1|sN1|U|1026
6V39|1|sN1|U|1027
6V39|1|sN1|C|1028
6V39|1|sN1|G|1029
6V39|1|sN1|G|1030

Current chains

Chain sN1

16s Ribosomal RNA

Nearby chains