HL_6V3A_006

3D structure

PDB id

6V3A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

6V3A|1|AN1|A|203

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6V3A_006 not in the Motif Atlas

Homologous match to HL_4WF9_006

Geometric discrepancy: 0.1266

The information below is about HL_4WF9_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_30068.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

6V3A|1|AN1|G|201
6V3A|1|AN1|A|202
6V3A|1|AN1|A|203
6V3A|1|AN1|A|204
6V3A|1|AN1|C|205
6V3A|1|AN1|A|206
6V3A|1|AN1|U|207
6V3A|1|AN1|C|208

Current chains

Chain AN1

23s ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L35

Chain K

50S ribosomal protein L15

Chain W

50S ribosomal protein L28