HL_6V3A_011
3D structure
- PDB id
- 6V3A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.82 Å
Loop
- Sequence
- GUGAUAUUC
- Length
- 9 nucleotides
- Bulged bases
- 6V3A|1|AN1|G|331, 6V3A|1|AN1|A|332, 6V3A|1|AN1|U|333
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6V3A_011 not in the Motif Atlas
- Homologous match to HL_5J7L_144
- Geometric discrepancy: 0.1138
- The information below is about HL_5J7L_144
- Detailed Annotation
- T-loop with unstacked turn
- Broad Annotation
- T-loop
- Motif group
- HL_27670.2
- Basepair signature
- cWW-tWH-F-F
- Number of instances in this motif group
- 13
Unit IDs
6V3A|1|AN1|G|329
6V3A|1|AN1|U|330
6V3A|1|AN1|G|331
6V3A|1|AN1|A|332
6V3A|1|AN1|U|333
6V3A|1|AN1|A|334
6V3A|1|AN1|U|335
6V3A|1|AN1|U|336
6V3A|1|AN1|C|337
Current chains
- Chain AN1
- 23s ribosomal RNA
Nearby chains
- Chain E
- 50S ribosomal protein L4
- Chain T
- 50S ribosomal protein L24
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