3D structure

PDB id
6V3A (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
2.82 Å

Loop

Sequence
GUGAUCC
Length
7 nucleotides
Bulged bases
6V3A|1|AN1|U|2209
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6V3A_051 not in the Motif Atlas
Homologous match to HL_5J7L_185
Geometric discrepancy: 0.3133
The information below is about HL_5J7L_185
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_49922.4
Basepair signature
cWW-F-F-F
Number of instances in this motif group
10

Unit IDs

6V3A|1|AN1|G|2205
6V3A|1|AN1|U|2206
6V3A|1|AN1|G|2207
6V3A|1|AN1|A|2208
6V3A|1|AN1|U|2209
6V3A|1|AN1|C|2210
6V3A|1|AN1|C|2211

Current chains

Chain AN1
23s ribosomal RNA

Nearby chains

Chain C
50S ribosomal protein L2

Coloring options:


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