HL_6V3A_056
3D structure
- PDB id
- 6V3A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.82 Å
Loop
- Sequence
- CCCACAAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6V3A_056 not in the Motif Atlas
- Homologous match to HL_4WF9_053
- Geometric discrepancy: 0.1541
- The information below is about HL_4WF9_053
- Detailed Annotation
- GNRA with extra cWW
- Broad Annotation
- GNRA with extra cWW
- Motif group
- HL_04259.3
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
6V3A|1|AN1|C|2351
6V3A|1|AN1|C|2352
6V3A|1|AN1|C|2353
6V3A|1|AN1|A|2354
6V3A|1|AN1|C|2355
6V3A|1|AN1|A|2356
6V3A|1|AN1|A|2357
6V3A|1|AN1|G|2358
Current chains
- Chain AN1
- 23s ribosomal RNA
Nearby chains
- Chain 2
- 50S ribosomal protein L35
- Chain K
- 50S ribosomal protein L15
- Chain V
- 50S ribosomal protein L27
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