3D structure

PDB id
6V3A (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
2.82 Å

Loop

Sequence
UCUUCGG
Length
7 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6V3A_075 not in the Motif Atlas
Geometric match to HL_1WZ2_007
Geometric discrepancy: 0.3459
The information below is about HL_1WZ2_007
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_75660.5
Basepair signature
cWW-F
Number of instances in this motif group
19

Unit IDs

6V3A|1|sN1|U|202
6V3A|1|sN1|C|203
6V3A|1|sN1|U|204
6V3A|1|sN1|U|205
6V3A|1|sN1|C|206
6V3A|1|sN1|G|207
6V3A|1|sN1|G|208

Current chains

Chain sN1
16s Ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:


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