HL_6V3A_078
3D structure
- PDB id
- 6V3A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.82 Å
Loop
- Sequence
- GACUGAGACACGGC
- Length
- 14 nucleotides
- Bulged bases
- 6V3A|1|sN1|C|326, 6V3A|1|sN1|G|327
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6V3A_078 not in the Motif Atlas
- Homologous match to HL_5J7L_008
- Geometric discrepancy: 0.1278
- The information below is about HL_5J7L_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_81205.3
- Basepair signature
- cWW-cWW-tWH-F-tWH-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
6V3A|1|sN1|G|316
6V3A|1|sN1|A|317
6V3A|1|sN1|C|318
6V3A|1|sN1|U|319
6V3A|1|sN1|G|320
6V3A|1|sN1|A|321
6V3A|1|sN1|G|322
6V3A|1|sN1|A|323
6V3A|1|sN1|C|324
6V3A|1|sN1|A|325
6V3A|1|sN1|C|326
6V3A|1|sN1|G|327
6V3A|1|sN1|G|328
6V3A|1|sN1|C|329
Current chains
- Chain sN1
- 16s Ribosomal RNA
Nearby chains
- Chain p
- 30S ribosomal protein S16
- Chain t
- 30S ribosomal protein S20
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