HL_6V3B_007

3D structure

PDB id

6V3B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S in Empty state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.91 Å

Loop

Sequence

CAAUUG

Length

6 nucleotides

Bulged bases

6V3B|1|AN1|U|235

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6V3B_007 not in the Motif Atlas

Homologous match to HL_4WF9_007

Geometric discrepancy: 0.5696

The information below is about HL_4WF9_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_51020.2

Basepair signature

cWW-cSW-F

Number of instances in this motif group

14

Unit IDs

6V3B|1|AN1|C|232
6V3B|1|AN1|A|233
6V3B|1|AN1|A|234
6V3B|1|AN1|U|235
6V3B|1|AN1|U|236
6V3B|1|AN1|G|237

Current chains

Chain AN1

23s ribosomal RNA

Nearby chains

Chain K

50S ribosomal protein L15