HL_6V3B_015

3D structure

PDB id

6V3B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S in Empty state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.91 Å

Loop

Sequence

CUGUGAG

Length

7 nucleotides

Bulged bases

6V3B|1|AN1|U|489

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6V3B_015 not in the Motif Atlas

Homologous match to HL_5J7L_148

Geometric discrepancy: 0.1719

The information below is about HL_5J7L_148

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

6V3B|1|AN1|C|486
6V3B|1|AN1|U|487
6V3B|1|AN1|G|488
6V3B|1|AN1|U|489
6V3B|1|AN1|G|490
6V3B|1|AN1|A|491
6V3B|1|AN1|G|492

Current chains

Chain AN1

23s ribosomal RNA

Nearby chains

Chain R

50S ribosomal protein L22