HL_6V3B_092
3D structure
- PDB id
- 6V3B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S in Empty state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.91 Å
Loop
- Sequence
- CCAGAGAUG
- Length
- 9 nucleotides
- Bulged bases
- 6V3B|1|sN1|C|1008
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6V3B_092 not in the Motif Atlas
- Geometric match to HL_3RG5_006
- Geometric discrepancy: 0.3262
- The information below is about HL_3RG5_006
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- tRNA anticodon loop
- Motif group
- HL_87268.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
6V3B|1|sN1|C|1007
6V3B|1|sN1|C|1008
6V3B|1|sN1|A|1009
6V3B|1|sN1|G|1010
6V3B|1|sN1|A|1011
6V3B|1|sN1|G|1012
6V3B|1|sN1|A|1013
6V3B|1|sN1|U|1014
6V3B|1|sN1|G|1015
Current chains
- Chain sN1
- 16s Ribosomal RNA
Nearby chains
- Chain n
- 30S ribosomal protein S14
- Chain s
- 30S ribosomal protein S19
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