HL_6V3D_064

3D structure

PDB id

6V3D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Acinetobacter baumannii Ribosome: 50S subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.95 Å

Loop

Sequence

CGCCAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6V3D_064 not in the Motif Atlas

Homologous match to HL_7A0S_064

Geometric discrepancy: 0.2059

The information below is about HL_7A0S_064

Detailed Annotation

Ribsomal LSU H95

Broad Annotation

Ribsomal LSU H95

Motif group

HL_65794.5

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

14

Unit IDs

6V3D|1|AN1|C|2697
6V3D|1|AN1|G|2698
6V3D|1|AN1|C|2699
6V3D|1|AN1|C|2700
6V3D|1|AN1|A|2701
6V3D|1|AN1|G|2702

Current chains

Chain AN1

23s ribosomal RNA

Nearby chains

Chain M

50S ribosomal protein L17