HL_6V3E_006
3D structure
- PDB id
- 6V3E (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Acinetobacter baumannii Ribosome: 30S subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.4 Å
Loop
- Sequence
- GGUAAAGGC
- Length
- 9 nucleotides
- Bulged bases
- 6V3E|1|sN1|G|262
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6V3E_006 not in the Motif Atlas
- Homologous match to HL_5J7L_006
- Geometric discrepancy: 0.2109
- The information below is about HL_5J7L_006
- Detailed Annotation
- GNRA related
- Broad Annotation
- GNRA related
- Motif group
- HL_84299.4
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
6V3E|1|sN1|G|255
6V3E|1|sN1|G|256
6V3E|1|sN1|U|257
6V3E|1|sN1|A|258
6V3E|1|sN1|A|259
6V3E|1|sN1|A|260
6V3E|1|sN1|G|261
6V3E|1|sN1|G|262
6V3E|1|sN1|C|263
Current chains
- Chain sN1
- 16s Ribosomal RNA
Nearby chains
- Chain q
- 30S ribosomal protein S17
- Chain t
- 30S ribosomal protein S20
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