3D structure

PDB id
6V3E (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of the Acinetobacter baumannii Ribosome: 30S subunit
Experimental method
ELECTRON MICROSCOPY
Resolution
4.4 Å

Loop

Sequence
GCAGCC(7MG)C
Length
8 nucleotides
Bulged bases
6V3E|1|sN1|G|521
QA status
Modified nucleotides: 7MG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6V3E_013 not in the Motif Atlas
Geometric match to HL_1WZ2_007
Geometric discrepancy: 0.2263
The information below is about HL_1WZ2_007
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_75660.5
Basepair signature
cWW-F
Number of instances in this motif group
19

Unit IDs

6V3E|1|sN1|G|518
6V3E|1|sN1|C|519
6V3E|1|sN1|A|520
6V3E|1|sN1|G|521
6V3E|1|sN1|C|522
6V3E|1|sN1|C|523
6V3E|1|sN1|7MG|524
6V3E|1|sN1|C|525

Current chains

Chain sN1
16s Ribosomal RNA

Nearby chains

Chain l
30S ribosomal protein S12

Coloring options:


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