HL_6V3E_015

3D structure

PDB id

6V3E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Acinetobacter baumannii Ribosome: 30S subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

CGGUGAAAUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6V3E_015 not in the Motif Atlas

Homologous match to HL_5J7L_015

Geometric discrepancy: 0.2922

The information below is about HL_5J7L_015

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.5

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

6V3E|1|sN1|C|686
6V3E|1|sN1|G|687
6V3E|1|sN1|G|688
6V3E|1|sN1|U|689
6V3E|1|sN1|G|690
6V3E|1|sN1|A|691
6V3E|1|sN1|A|692
6V3E|1|sN1|A|693
6V3E|1|sN1|U|694
6V3E|1|sN1|G|695

Current chains

Chain sN1

16s Ribosomal RNA

Nearby chains

Chain g

30S ribosomal protein S7

Chain k

30S ribosomal protein S11