HL_6V3E_017

3D structure

PDB id

6V3E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Acinetobacter baumannii Ribosome: 30S subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

GAUUAGAUACC

Length

11 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6V3E_017 not in the Motif Atlas

Homologous match to HL_6CZR_088

Geometric discrepancy: 0.2358

The information below is about HL_6CZR_088

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.4

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

13

Unit IDs

6V3E|1|sN1|G|783
6V3E|1|sN1|A|784
6V3E|1|sN1|U|785
6V3E|1|sN1|U|786
6V3E|1|sN1|A|787
6V3E|1|sN1|G|788
6V3E|1|sN1|A|789
6V3E|1|sN1|U|790
6V3E|1|sN1|A|791
6V3E|1|sN1|C|792
6V3E|1|sN1|C|793

Current chains

Chain sN1

16s Ribosomal RNA

Nearby chains

Chain k

30S ribosomal protein S11