HL_6VLZ_018

3D structure

PDB id

6VLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

AACACU

Length

6 nucleotides

Bulged bases

6VLZ|1|A|A|2356

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6VLZ_018 not in the Motif Atlas

Geometric match to HL_5TBW_044

Geometric discrepancy: 0.3084

The information below is about HL_5TBW_044

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81100.1

Basepair signature

cWW

Number of instances in this motif group

4

Unit IDs

6VLZ|1|A|A|2355
6VLZ|1|A|A|2356
6VLZ|1|A|C|2357
6VLZ|1|A|A|2358
6VLZ|1|A|C|2359
6VLZ|1|A|U|2360

Current chains

Chain A

16s rRNA

Nearby chains

Chain O

39S ribosomal protein L17, mitochondrial

Chain T

39S ribosomal protein L22, mitochondrial