HL_6VLZ_023

3D structure

PDB id

6VLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

CACAUG

Length

6 nucleotides

Bulged bases

6VLZ|1|A|A|2558

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6VLZ_023 not in the Motif Atlas

Geometric match to HL_5TBW_006

Geometric discrepancy: 0.1327

The information below is about HL_5TBW_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

6VLZ|1|A|C|2555
6VLZ|1|A|A|2556
6VLZ|1|A|C|2557
6VLZ|1|A|A|2558
6VLZ|1|A|U|2559
6VLZ|1|A|G|2560

Current chains

Chain A

16s rRNA

Nearby chains

Chain D

39S ribosomal protein L2, mitochondrial