HL_6VLZ_027

3D structure

PDB id

6VLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

GUAUACC

Length

7 nucleotides

Bulged bases

6VLZ|1|A|U|2786

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6VLZ_027 not in the Motif Atlas

Geometric match to HL_8C3A_039

Geometric discrepancy: 0.3077

The information below is about HL_8C3A_039

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

6VLZ|1|A|G|2758
6VLZ|1|A|U|2759
6VLZ|1|A|A|2760
6VLZ|1|A|U|2786
6VLZ|1|A|A|2787
6VLZ|1|A|C|2788
6VLZ|1|A|C|2789

Current chains

Chain A

16s rRNA

Nearby chains

Chain H

39S ribosomal protein L9, mitochondrial