HL_6VLZ_035

3D structure

PDB id

6VLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

AGUAAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6VLZ_035 not in the Motif Atlas

Homologous match to HL_5J7L_196

Geometric discrepancy: 0.3106

The information below is about HL_5J7L_196

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

6VLZ|1|A|A|3081
6VLZ|1|A|G|3082
6VLZ|1|A|U|3083
6VLZ|1|A|A|3084
6VLZ|1|A|A|3085
6VLZ|1|A|U|3086

Current chains

Chain A

16s rRNA

Nearby chains

Chain D

39S ribosomal protein L2, mitochondrial