HL_6VLZ_051
3D structure
- PDB id
- 6VLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.97 Å
Loop
- Sequence
- UAAAUCAACAAA
- Length
- 12 nucleotides
- Bulged bases
- 6VLZ|1|AA|A|1116, 6VLZ|1|AA|U|1119, 6VLZ|1|AA|C|1120, 6VLZ|1|AA|A|1125
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6VLZ_051 not in the Motif Atlas
- Geometric match to HL_8C3A_022
- Geometric discrepancy: 0.2894
- The information below is about HL_8C3A_022
- Detailed Annotation
- Externally structured
- Broad Annotation
- Externally structured
- Motif group
- HL_96426.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 4
Unit IDs
6VLZ|1|AA|U|1115
6VLZ|1|AA|A|1116
6VLZ|1|AA|A|1117
6VLZ|1|AA|A|1118
6VLZ|1|AA|U|1119
6VLZ|1|AA|C|1120
6VLZ|1|AA|A|1121
6VLZ|1|AA|A|1122
6VLZ|1|AA|C|1123
6VLZ|1|AA|A|1124
6VLZ|1|AA|A|1125
6VLZ|1|AA|A|1126
Current chains
- Chain AA
- 12s rRNA
Nearby chains
- Chain A2
- Coiled-coil-helix-coiled-coil-helix domain-containing protein 1
- Chain A3
- Aurora kinase A-interacting protein
- Chain AB
- 28S ribosomal protein S2, mitochondrial
- Chain AD
- 28S ribosomal protein S5, mitochondrial
- Chain AE
- 28S ribosomal protein S6, mitochondrial
- Chain AS
- 28S ribosomal protein S23, mitochondrial
Coloring options: