HL_6VLZ_061

3D structure

PDB id

6VLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

UUAAAA

Length

6 nucleotides

Bulged bases

6VLZ|1|B|U|1614

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6VLZ_061 not in the Motif Atlas

Geometric match to HL_5B63_003

Geometric discrepancy: 0.1816

The information below is about HL_5B63_003

Detailed Annotation

tRNA D-loop

Broad Annotation

No text annotation

Motif group

HL_20490.1

Basepair signature

cWW-cWS-F

Number of instances in this motif group

13

Unit IDs

6VLZ|1|B|U|1613
6VLZ|1|B|U|1614
6VLZ|1|B|A|1615
6VLZ|1|B|A|1616
6VLZ|1|B|A|1621
6VLZ|1|B|A|1622

Current chains

Chain B

tRNAval

Nearby chains

Chain 6

39S ribosomal protein L38, mitochondrial

Chain P

Mitochondrial ribosomal protein L18, isoform CRA_b