HL_6VLZ_065

3D structure

PDB id

6VLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

UUUGUUCAA

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6VLZ_065 not in the Motif Atlas

Geometric match to HL_8KAH_003

Geometric discrepancy: 0.3935

The information below is about HL_8KAH_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_89457.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

2

Unit IDs

6VLZ|1|A|U|3037
6VLZ|1|A|U|3038
6VLZ|1|A|U|3039
6VLZ|1|A|G|3040
6VLZ|1|A|U|3041
6VLZ|1|A|U|3042
6VLZ|1|A|C|3043
6VLZ|1|A|A|3044
6VLZ|1|A|A|3045

Current chains

Chain A

16s rRNA

Nearby chains

Chain L

39S ribosomal protein L14, mitochondrial