HL_6VMY_005
3D structure
- PDB id
- 6VMY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the B. subtilis cobalamin riboswitch
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.25 Å
Loop
- Sequence
- UCUGCGAGGA
- Length
- 10 nucleotides
- Bulged bases (A, C, G, U)
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_19727.1
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 3
Unit IDs
6VMY|1|A|U|333
6VMY|1|A|C|334
6VMY|1|A|U|335
6VMY|1|A|G|336
6VMY|1|A|C|337
6VMY|1|A|G|338
6VMY|1|A|A|339
6VMY|1|A|G|340
6VMY|1|A|G|341
6VMY|1|A|A|342
Current chains
- Chain A
- B. subtilis cobalamin riboswitch
Nearby chains
No other chains within 10ÅColoring options: