6VMY Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_6VMY_001 | 1/A/223:229 | GNRA HL_34789.2 | ||
| HL_6VMY_002 | 1/A/253:260 | No text annotation HL_10611.1 | ||
| HL_6VMY_003 | 1/A/268:274 | Pseudoknot geometry HL_30680.5 | ||
| HL_6VMY_004 | 1/A/287:293 | UNCG variation HL_51020.2 | ||
| HL_6VMY_005 | 1/A/333:342 | No text annotation HL_14856.1 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_6VMY_001 | 1/A/219:222, 1/A/230:232 | No text annotation IL_49140.1 | ||
| IL_6VMY_002 | 1/A/279:283, 1/A/297:302 | UAA/GAN related IL_10133.1 | ||
| IL_6VMY_004 | 1/A/326:333, 1/A/342:348 | No text annotation IL_06606.1 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_6VMY_003 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_6VMY_001 | 1/A/213:214, 1/A/237:243, 1/A/311:312 | No text annotation J3_36023.1 | ||
| J4_6VMY_001 | 1/A/245:249, 1/A/264:267, 1/A/275:277, 1/A/304:309 | No text annotation J4_72452.1 |
Problematic loops
No problematic loops
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