HL_6VWN_070
3D structure
- PDB id
- 6VWN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CUCG
- Length
- 4 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6VWN_070 not in the Motif Atlas
- Geometric match to HL_5TBW_071
- Geometric discrepancy: 0.3303
- The information below is about HL_5TBW_071
- Detailed Annotation
- Mini UNCG
- Broad Annotation
- No text annotation
- Motif group
- HL_43793.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 50
Unit IDs
6VWN|1|2|C|1728
6VWN|1|2|U|1729
6VWN|1|2|C|1730
6VWN|1|2|G|1731
Current chains
- Chain 2
- 23S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: