HL_6VYT_024

3D structure

PDB id

6VYT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli transcription-translation complex A2 (TTC-A2) containing a 15 nt long mRNA spacer, NusG, and fMet-tRNAs at P-site and E-site

Experimental method

ELECTRON MICROSCOPY

Resolution

14 Å

Loop

Sequence

CCUUGAG

Length

7 nucleotides

Bulged bases

6VYT|1|D|U|842

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6VYT|1|D|C|840
6VYT|1|D|C|841
6VYT|1|D|U|842
6VYT|1|D|U|843
6VYT|1|D|G|844
6VYT|1|D|A|845
6VYT|1|D|G|846

Current chains

Chain D

16S rRNA

Nearby chains

Chain C

30S ribosomal protein S18

Chain H

30S ribosomal protein S1