3D structure

PDB id
6VYW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Escherichia coli transcription-translation complex C3 (TTC-C3) containing mRNA with a 27 nt long spacer, NusG, and fMet-tRNAs at E-site and P-site
Experimental method
ELECTRON MICROSCOPY
Resolution
7 Å

Loop

Sequence
CCUUGAG
Length
7 nucleotides
Bulged bases
6VYW|1|D|U|842
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6VYW|1|D|C|840
6VYW|1|D|C|841
6VYW|1|D|U|842
6VYW|1|D|U|843
6VYW|1|D|G|844
6VYW|1|D|A|845
6VYW|1|D|G|846

Current chains

Chain D
16S rRNA

Nearby chains

Chain C
30S ribosomal protein S18
Chain H
30S ribosomal protein S1

Coloring options:

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