HL_6VYY_108

3D structure

PDB id

6VYY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli transcription-translation complex C5 (TTC-C5) containing mRNA with a 21 nt long spacer, NusG, and fMet-tRNAs at E-site and P-site

Experimental method

ELECTRON MICROSCOPY

Resolution

9.9 Å

Loop

Sequence

GGACCUUCGGGC

Length

12 nucleotides

Bulged bases

6VYY|1|D|U|209

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6VYY|1|D|G|203
6VYY|1|D|G|204
6VYY|1|D|A|205
6VYY|1|D|C|206
6VYY|1|D|C|207
6VYY|1|D|U|208
6VYY|1|D|U|209
6VYY|1|D|C|210
6VYY|1|D|G|211
6VYY|1|D|G|212
6VYY|1|D|G|213
6VYY|1|D|C|214

Current chains

Chain D

16S rRNA

Nearby chains