HL_6VZ5_065

3D structure

PDB id

6VZ5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli transcription-translation complex D3 (TTC-D3) containing mRNA with a 21 nt long spacer, NusG, and fMet-tRNAs at E-site and P-site

Experimental method

ELECTRON MICROSCOPY

Resolution

8.9 Å

Loop

Sequence

UUAGAAGCA

Length

9 nucleotides

Bulged bases

6VZ5|1|a|A|1070

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6VZ5|1|a|U|1065
6VZ5|1|a|U|1066
6VZ5|1|a|A|1067
6VZ5|1|a|G|1068
6VZ5|1|a|A|1069
6VZ5|1|a|A|1070
6VZ5|1|a|G|1071
6VZ5|1|a|C|1072
6VZ5|1|a|A|1073

Current chains

Chain a

23S rRNA

Nearby chains