HL_6VZ5_109

3D structure

PDB id

6VZ5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli transcription-translation complex D3 (TTC-D3) containing mRNA with a 21 nt long spacer, NusG, and fMet-tRNAs at E-site and P-site

Experimental method

ELECTRON MICROSCOPY

Resolution

8.9 Å

Loop

Sequence

GGACCUUCGGGC

Length

12 nucleotides

Bulged bases

6VZ5|1|D|U|209

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6VZ5|1|D|G|203
6VZ5|1|D|G|204
6VZ5|1|D|A|205
6VZ5|1|D|C|206
6VZ5|1|D|C|207
6VZ5|1|D|U|208
6VZ5|1|D|U|209
6VZ5|1|D|C|210
6VZ5|1|D|G|211
6VZ5|1|D|G|212
6VZ5|1|D|G|213
6VZ5|1|D|C|214

Current chains

Chain D

16S rRNA

Nearby chains