HL_6W6K_015

3D structure

PDB id

6W6K (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S-Activated-high-Mg2+

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGGUGAAAUG

Length

10 nucleotides

Bulged bases

6W6K|1|A|G|693

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6W6K_015 not in the Motif Atlas

Homologous match to HL_4LFB_015

Geometric discrepancy: 0.3487

The information below is about HL_4LFB_015

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_38491.2

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

12

Unit IDs

6W6K|1|A|C|689
6W6K|1|A|G|690
6W6K|1|A|G|691
6W6K|1|A|U|692
6W6K|1|A|G|693
6W6K|1|A|A|694
6W6K|1|A|A|695
6W6K|1|A|A|696
6W6K|1|A|U|697
6W6K|1|A|G|698

Current chains

Chain A

16S rRNA

Nearby chains

Chain K

30S ribosomal protein S11