3D structure

PDB id
6W6K (explore in PDB, NAKB, or RNA 3D Hub)
Description
30S-Activated-high-Mg2+
Experimental method
ELECTRON MICROSCOPY
Resolution
3.6 Å

Loop

Sequence
GUUAAGUC
Length
8 nucleotides
Bulged bases
6W6K|1|A|G|1094
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6W6K_025 not in the Motif Atlas
Homologous match to HL_4LFB_025
Geometric discrepancy: 0.3543
The information below is about HL_4LFB_025
Detailed Annotation
T-loop related
Broad Annotation
T-loop
Motif group
HL_77436.5
Basepair signature
cWW-F-F-F-F-F
Number of instances in this motif group
23

Unit IDs

6W6K|1|A|G|1089
6W6K|1|A|U|1090
6W6K|1|A|U|1091
6W6K|1|A|A|1092
6W6K|1|A|A|1093
6W6K|1|A|G|1094
6W6K|1|A|U|1095
6W6K|1|A|C|1096

Current chains

Chain A
16S rRNA

Nearby chains

No other chains within 10Å

Coloring options:


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