HL_6W6K_033

3D structure

PDB id

6W6K (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S-Activated-high-Mg2+

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUUG

Length

4 nucleotides

Bulged bases

6W6K|1|A|U|84, 6W6K|1|A|U|85

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6W6K_033 not in the Motif Atlas

Geometric match to HL_2B3J_003

Geometric discrepancy: 0.3527

The information below is about HL_2B3J_003

Detailed Annotation

Mini UNCG with extended bulge

Broad Annotation

Mini UNCG with extended bulge

Motif group

HL_48778.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

6W6K|1|A|C|83
6W6K|1|A|U|84
6W6K|1|A|U|85
6W6K|1|A|G|86

Current chains

Chain A

16S rRNA

Nearby chains