HL_6W6L_009
3D structure
- PDB id
- 6W6L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human ribosome-TMCO1 translocon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.84 Å
Loop
- Sequence
- CGGCGAG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6W6L_009 not in the Motif Atlas
- Homologous match to HL_8C3A_003
- Geometric discrepancy: 0.1049
- The information below is about HL_8C3A_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_67216.9
- Basepair signature
- cWW-cWW-F-tSH
- Number of instances in this motif group
- 9
Unit IDs
6W6L|1|t|C|89
6W6L|1|t|G|90
6W6L|1|t|G|91
6W6L|1|t|C|92
6W6L|1|t|G|93
6W6L|1|t|A|94
6W6L|1|t|G|95
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain M
- 60S ribosomal protein L13
- Chain R
- 60S ribosomal protein L18
- Chain b
- 60S ribosomal protein L27a
- Chain p
- 60S ribosomal protein L36a
- Chain v
- Transfer RNA; tRNA
Coloring options: