HL_6W6L_014
3D structure
- PDB id
- 6W6L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human ribosome-TMCO1 translocon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.84 Å
Loop
- Sequence
- GGUAAACUCC
- Length
- 10 nucleotides
- Bulged bases
- 6W6L|1|t|G|309, 6W6L|1|t|U|310
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6W6L_014 not in the Motif Atlas
- Homologous match to HL_8C3A_009
- Geometric discrepancy: 0.1774
- The information below is about HL_8C3A_009
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- No text annotation
- Motif group
- HL_15076.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
6W6L|1|t|G|308
6W6L|1|t|G|309
6W6L|1|t|U|310
6W6L|1|t|A|311
6W6L|1|t|A|312
6W6L|1|t|A|313
6W6L|1|t|C|314
6W6L|1|t|U|315
6W6L|1|t|C|316
6W6L|1|t|C|317
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain O
- 60S ribosomal protein L15
- Chain b
- 60S ribosomal protein L27a
- Chain j
- 60S ribosomal protein L36
- Chain p
- 60S ribosomal protein L36a
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